Publications

Krutovsky, K. V., Popova, A. A., Yakovlev, I. A., Yanbaev, Y. A. & Matveev, S. M. (2025). Response of Pedunculate Oak (Quercus robur L.) to Adverse Environmental Conditions in Genetic and Dendrochronological Studies. Plants, 14, 109.
Zhou, Q., Karunarathne, P., Andersson‐Li, L., Chen, C., Opgenoorth, L., Heer, K., Piotti, A., Vendramin, G. G., Nakvasina, E., Lascoux, M. & Milesi, P. (2024). Recurrent hybridization and gene flow shaped Norway and Siberian spruce evolutionary history over multiple glacial cycles. Molecular Ecology, 33, e17495.
Zhao, H., Wu, F., Maurice, S., Pavlov, I. N., Krutovsky, K. V., Liu, H.-G., Yuan, Y. & Dai, Y.-C. (2024). Large-scale phylogenomic insights into the evolution of the Hymenochaetales. Mycology, 1-18.
Vajana, E., Andrello, M., Avanzi, C., Bagnoli, F., Vendramin, G. G. & Piotti, A. (2024). Spatial conservation planning of forest genetic resources in a Mediterranean multi-refugial area. Biological Conservation, 293, 110599.
Sonnenwyl, V., Dauphin, B., Fragniere, Y., Clement, B., Gruenig, S., Brodbeck, S., Parisod, C., Kozlowski, G. & Gugerli, F. (2024). Genetic underpinning of historical afforestation with allochthonous in the northwestern Swiss Alps. Alpine Botany, 134, 1-13.
Perry, A., Aravanopoulos, F. A., Budde, K. B., Hansen, O. K., Rellstab, C., Schroeder, H. & Curtu, A. L. (2024). Resilient forests for the future. Tree Genetics & Genomes, 20.
Oggioni, S. D., Rossi, L. M. W., Avanzi, C., Marchetti, M., Piotti, A. & Vacchiano, G. (2024). Drought responses of Italian silver fir provenances in a climate change perspective. Dendrochronologia, 85, 126184.
Novikova, S. V., Oreshkova, N. V., Sharov, V. V., Kuzmin, D. A., Demidko, D. A., Bisirova, E. M., Zhirnova, D. F., Belokopytova, L. V., Babushkina, E. A. & Krutovsky, K. V. (2024). Study of the Genetic Mechanisms of Siberian Stone Pine (Pinus sibirica Du Tour) Adaptation to the Climatic and Pest Outbreak Stresses Using Dendrogenomic Approach. International Journal of Molecular Sciences, 25, 11767.
Nieves-Orduña, H. E., Müller, M., Krutovsky, K. V. & Gailing, O. (2024). Genotyping of cacao (Theobroma cacao L.) germplasm resources with SNP markers linked to agronomic traits reveals signs of selection. Tree Genetics & Genomes, 20, article number 13.
Milesi, P., Kastally, C., Dauphin, B., Cervantes, S., Bagnoli, F., Budde, K. B., Cavers, S., Fady, B., Faivre-Rampant, P., Gonzalez-Martinez, S. C., Grivet, D., Gugerli, F., Jorge, V., Lesur Kupin, I., Ojeda, D. I., Olsson, S., Opgenoorth, L., Pinosio, S., Plomion, C., Rellstab, C., Rogier, O., Scalabrin, S., Scotti, I., Vendramin, G. G., Westergren, M., Lascoux, M., Pyhajarvi, T. & GenTree, C. (2024). Resilience of genetic diversity in forest trees over the Quaternary. Nat Commun, 15, 8538.
Litovchenko, D. A., Popova, A. A. & Shestibratov, K. F. K. V. K. (2024). Climate Response and Radial Growth Dynamics of Pedunculate Oak (Quercus robur L.) Plus Trees and Their Half-Sib Offspring in Periods of Severe Droughts in the Forest-Steppe Zone of Eastern Europe. Plants, 13, 3213.
Kremer, A., Delcamp, A., Lesur, I., Wagner, S., Rellstab, C., Guichoux, E. & Leroy, T. (2024). Whole-genome screening for near-diagnostic genetic markers for four western European white oak species identification. Annals of Forest Science, 81, 21.
Kolesnikova, A. I., Pavlov, I. N., Litovka, Y. A., Oreshkova, N. V., Timofeev, A. A., Litvinova, E. A., Petrenko, S. M. & Krutovsky, K. V. (2024). Molecular identification of wood-decaying fungi of Armillaria genus widespread in Eastern Siberia and the Far East of Russia using ITS, IGS-1-1 and TEF-1Α genetic markers. Mikologiya i Fitopatologiya (Micology and Phytopathology), 58, 231–245.
Budde, K. B., Rellstab, C., Heuertz, M., Gugerli, F., Hanika, T., Verdú, M., Pausas, J. G. & González‐Martínez, S. C. (2024). Divergent selection in a Mediterranean pine on local spatial scales. Journal of Ecology, 112, 278-290.
Avanzi, C., Vitali, A., Piovani, P., Spanu, I., Urbinati, C., Vendramin, G. G., Garbarino, M. & Piotti, A. (2024). Genetic consequences of landscape features in two rear edge, highly fragmented metapopulations of a mediterranean conifer. Landscape Ecology, 39, 87.
Zhao, H., Dai, Y.-C., Wu, F., Liu, X.-Y., Maurice, S., Krutovsky, K. V., Pavlov, I. N., Lindner, D. L., Martin, F. M. & Yuan, Y. (2023). Insights into the ecological diversification of the Hymenochaetales based on comparative genomics and phylogenomics with an emphasis on Coltricia. Genome Biology and Evolution, 15, 1-15.
Toth, E. G., Cseke, K., Benke, A., Lados, B. B., Tomov, V. T., Zhelev, P., Kampel, J. D., Borovics, A. & Kobolkuti, Z. A. (2023). Key triggers of adaptive genetic variability of sessile oak [Q. petraea (Matt.) Liebl.] from the Balkan refugia: outlier detection and association of SNP loci from ddRAD-seq data. Heredity.
Reutimann, O., Dauphin, B., Baltensweiler, A., Gugerli, F., Kremer, A. & Rellstab, C. (2023). Abiotic factors predict taxonomic composition and genetic admixture in populations of hybridizing white oak species (Quercus sect. Quercus) on regional scale. Tree Genetics & Genomes, 19.
Piovesan, G., Rita, A., Biondi, F., Baliva, M., Borghetti, M., Brunetti, M., De Vivo, G., Di Filippo, A., Dinella, A., Gentilesca, T., Maugeri, M., Palli, J., Piotti, A., Saba, E. P., Ripullone, F., Schettino, A. & Vendramin, G. G. (2023). Bell-shaped tree-ring responses to air temperature drive productivity trends in long-lived mountain Mediterranean pines. Science of The Total Environment, 890, 164103.
Oreshkova, N. V., Bondar, E. I., Sharov, V. V., Dhungana, S. P., Gailing, O. & Krutovsky, K. V. (2023). Population genetic variation of microsatellite markers developed for Siberian fir (Abies sibirica Ledeb.) and European silver fir (A. alba Mill.) using whole genome sequencing data. Plant Genetic Resources, 21, 149-158.
Novikova, S. V., Sharov, V. V., Oreshkova, N. V., Simonov, E. P. & Krutovsky, K. V. (2023). Genetic adaptation of Siberian larch (Larix sibirica Ledeb.) to high altitudes. International Journal of Molecular Sciences, 24, 4530.
Novikova, S. V., Oreshkova, N. V., Sharov, V. V., Zhirnova, D. F., Belokopytova, L. V., Babushkina, E. A. & Krutovsky, K. V. (2023). Study of the Genetic Adaptation Mechanisms of Siberian Larch (Larix sibirica Ledeb.) Regarding Climatic Stresses Based on Dendrogenomic Analysis. Forests, 14, 2358.
Novikova, S. V., Oreshkova, N. V., Sharov, V. V., Semerikov, V. L. & Krutovsky, K. V. (2023). Genetic structure and geographical differentiation of Siberian larch (Larix sibirica Ledeb.) populations based on genome genotyping by sequencing. Contemporary Problems of Ecology, 16, 631–644.
Nieves-Orduña, H. E., Krutovsky, K. V. & Gailing, O. (2023). Geographic distribution, conservation, and genomic resources of cacao Theobroma cacao L. Crop Science, 63, 1750–1778.
Gugerli, F., Brodbeck, S., Lendvay, B., Dauphin, B., Bagnoli, F., van der Knaap, W. O., Tinner, W., Hohn, M., Vendramin, G. G., Morales-Molino, C. & Schworer, C. (2023). A range-wide postglacial history of Swiss stone pine based on molecular markers and palaeoecological evidence. Journal of Biogeography, 50, 1049-1062.
Dauphin, B., Rellstab, C., Wueest, R. O., Karger, D. N., Holderegger, R., Gugerli, F. & Manel, S. (2023). Re-thinking the environment in landscape genomics. Trends in Ecology & Evolution, 38, 261-274.
Centenaro, G., Petraglia, A., Carbognani, M., Piotti, A., Hudek, C., Büntgen, U. & Crivellaro, A. (2023). The oldest known clones of Salix herbacea growing in the Northern Apennines, Italy are at least 2000 years old. American Journal of Botany, 110, e16243.
BIBIKOV, N., VORONINA, E. & KURAKOV, A. (2023). MYCOLOGY AND PHYTOPATHOLOGY. MYCOLOGY AND PHYTOPATHOLOGY, 57, 79-85.
Batalova, A. Y. & Krutovsky, K. V. (2023). Genetic and epigenetic mechanisms of longevity in forest trees. International Journal of Molecular Sciences, 24, 10403.
Zhirnova, D. F., Belokopytova, L. V., Krutovsky, K. V., Kholdaenko, Y. A., Babushkina, E. A. & Vaganov, E. A. (2022). Spatial-coherent dynamics and climatic signal in radial growth of Siberian stone pine (Pinus sibirica Du Tour) in subalpine stands along the Western Sayan Mountains. Forests, 13, 1994.
Tikhomirova, T. S., Krutovsky, K. V. & Shestibratov, K. A. (2022). Molecular traits for adaptation to drought and salt stress in birch, oak and poplar species. Forests, 14, 7.
Shevchenko, G. V. & Krutovsky, K. V. (2022). Mechanical stress effects on transcriptional regulation of genes encoding microtubule- and actin-associated proteins. Physiology and Molecular Biology of Plants, 28, 17-30.
Schulte, L., Meucci, S., Stoof-Leichsenring, K., Heitkam, T., Schmidt, N., von Hippel, B., Andreev, A. A., Diekmann, B., Biskaborn, B. K. & Wagner, B. (2022). Larix species range dynamics in Siberia since the Last Glacial captured from sedimentary ancient DNA. Communications Biology, 5.
Popov, V. N., Syromyatnikov, M. Y., Franceschi, C., Moskalev, A. A. & Krutovsky, K. V. (2022). Genetic mechanisms of aging in plants: What can we learn from them? Ageing Research Reviews, 77, 101601.
Neophytou, C., Heer, K., Milesi, P., Peter, M., Pyhajarvi, T., Westergren, M., Rellstab, C. & Gugerli, F. (2022). Genomics and adaptation in forest ecosystems. Tree Genetics & Genomes, 18.
Kuchma, O., Rebola-Lichtenberg, J., Janz, D., Krutovsky, K. V., Ammer, C., Polle, A. & Gailing, O. (2022). Response of poplar leaf transcriptome to changed management and environmental conditions in pure and mixed with black locust stands. Forests, 13, 147.
Krutovsky, K. V. (2022). Dendrogenomics is a new interdisciplinary field of research of the adaptive genetic potential of forest tree populations integrating dendrochronology, dendroecology, dendroclimatology and genomics. Russian Journal of Genetics, 58, 1273–1286.
Kirichenko, A. D., Poroshina, A. A., Sherbakov, D. Y., Sadovsky, M. G. & Krutovsky, K. V. (2022). Comparative analysis of alignment-free genome clustering and whole genome alignment-based phylogenomic relationship of coronaviruses. PLoS One, 17, e0264640.
Kersten, B., Rellstab, C., Schroeder, H., Brodbeck, S., Fladung, M., Krutovsky, K. V. & Gugerli, F. (2022). The mitochondrial genome sequence of Abies alba Mill. reveals a high structural and combinatorial diversity. BMC Genomics, 23.
Gugerli, F., Brodbeck, S., Bebi, P., Bollmann, K., Dauphin, B., Gossner, M., Krumm, F., Peter, M., Queloz, V., Reiss, G., Rellstab, C., Stofer, S., von Arx, G., Wasem, U. & Zweifel, R. (2022). Die Arve - Portrait eines Gebirgswaldbaums. WSL Merkblatt, 72.
Gugerli, F., Brodbeck, S., Bebi, P., Bollmann, K., Dauphin, B., Gossner, M., Krumm, F., Peter, M., Queloz, V., Reiss, G., Rellstab, C., Stofer, S., von Arx, G., Wasem, U. & Zweifel, R. (2022). L'arole - portrait d'un montagnard. WSL Notice pour le practicien, 72.
Fonti, P., Rellstab, C. & Martinez-Sancho, E. (2022). Deciphering 'time to hydraulic failure' to select drought-resistant tree provenances. Tree Physiology, 42, 704-707.
Bondar, E. I., Troukhan, M., Krutovsky, K. V. & Tatarinova, T. V. (2022). Genome-wide prediction of transcription start sites in conifers. International Journal of Molecular Sciences, 23, 1735.
Bondar, E. I., Feranchuk, S. I., Miroshnikova, K. A., Sharov, V. V., Kuzmin, D. A., Oreshkova, N. V. & Krutovsky, K. V. (2022). Annotation of Siberian larch (Larix sibirica Ledeb.) nuclear genome – one of the most cold resistant tree species in the only seasonal senescence Genus in Pinaceae. Plants, 11, 2062.
Biriukov, V. V., Pavlov, I. N., Litovka, Y. A., Oreshkova, N. V., Sharov, V. V., Simonov, E. P., Kuzmin, D. A. & Krutovsky, K. V. (2022). De novo transcriptome assembly and annotation of a new plant pathogenic Corinectria sp. strain in Siberia. Mikologiya i Fitopatologiya (Micology and Phytopathology), 56, 114-126.
Belokopytova, L. V., Zhirnova, D. F., Krutovsky, K. V., Mapitov, N. B., Vaganov, E. A. & Babushkina, E. A. (2022). Species-and age-specific growth reactions to extreme droughts of the keystone tree species across forest-steppe and sub-taiga habitats of South Siberia. Forests, 13, 1027.
Batalova, A. Y., Putintseva, Y. A., Sadovsky, M. G. & Krutovsky, K. V. (2022). Comparative genomics of seasonal senescence in forest trees. International Journal of Molecular Sciences, 23, 3761.
Aleksić, J. M., Mataruga, M., Daničić, V., Cvjetković, B., Milanović, Đ., Giuseppe Vendramin, G., Avanzi, C. & Piotti, A. (2022). High pollen immigration but no gene flow via-seed into a Genetic Conservation Unit of the endangered Picea omorika after disturbance. Forest Ecology and Management, 510, 120115.
Toth, E. G., Kobolkuti, Z. A., Cseke, K., Kampel, J. D., Takacs, R., Tomov, V. T., Abran, P., Stojnic, S., Vastag, E., Mataruga, M., Danicic, V., Tahirukaj, E., Zhelev, P., Orlovic, S., Benke, A. & Borovics, A. (2021). A genomic dataset of single-nucleotide polymorphisms generated by ddRAD tag sequencing in Q. petraea (Matt.) Liebl. populations from Central-Eastern Europe and Balkan Peninsula (vol 78, 43, 2021). Annals of Forest Science, 78.
Titievsky, A., Putintseva, Y. A., Taranenko, E. A., Baskin, S., Oreshkova, N. V., Brodsky, E., Sharova, A. V., Sharov, V. V., Panov, J. & Kuzmin, D. A. (2021). Comparative genomics analysis of repetitive elements in ten gymnosperm species: “dark repeatome” and its abundance in conifer and Gnetum species. Life, 11, 1234.
Tarieiev, A. S., Gailing, O. & Krutovsky, K. V. (2021). ITS secondary structure reconstruction to resolve taxonomy and phylogeny of the Betula L. genus. PeersJ, 9.
Shestibratov, K. A., Baranov, O. Y., Mescherova, E. N., Kiryanov, P. S., Panteleev, S. V., Mozharovskaya, L. V., Krutovsky, K. V. & Padutov, V. E. (2021). Structure and phylogeny of the curly birch chloroplast genome. Frontiers in Genetics, 12.
Rellstab, C., Dauphin, B. & Exposito-Alonso, M. (2021). Prospects and limitations of genomic offset in conservation management. Evolutionary Applications, 14, 1202-1212.
Rellstab, C. (2021). Genomics helps to predict maladaptation to climate change. Nature Climate Change, 11, 85-86.
Postolache, D., Oddou‐Muratorio, S., Vajana, E., Bagnoli, F., Guichoux, E., Hampe, A., Le Provost, G., Lesur, I., Popescu, F., Scotti, I., Piotti, A. & Vendramin, G. G. (2021). Genetic signatures of divergent selection in European beech ( Fagus sylvatica L.) are associated with the variation in temperature and precipitation across its distribution range. Molecular Ecology, 30, 5029-5047.
Opgenoorth, L. & Rellstab, C. (2021). Tackling the challenges of evolutionary forest research with multidata approaches. Molecular Ecology, 30, 3893-3895.
Opgenoorth, L., Dauphin, B., Benavides, R., Heer, K., Alizoti, P., Martinez-Sancho, E., Alia, R., Ambrosio, O., Audrey, A., Aunon, F., Avanzi, C., Avramidou, E., Bagnoli, F., Barbas, E., Bastias, C. C., Bastien, C., Ballesteros, E., Beffa, G., Bernier, F., Bignalet, H., Bodineau, G., Bouic, D., Brodbeck, S., Brunetto, W., Buchovska, J., Buy, M., Cabanillas-Saldana, A. M., Carvalho, B., Cheval, N., Climent, J. M., Correard, M., Cremer, E., Danusevicius, D., Del Cano, F., Denou, J. L., di Gerardi, N., Dokhelar, B., Ducousso, A., Nilsen, A. E., Farsakoglou, A. M., Fonti, P., Ganopoulos, I., del Barrio, J. M. G., Gilg, O., Gonzalez-Martinez, S. C., Graf, R., Gray, A., Grivet, D., Gugerli, F., Hartleitner, C., Hollenbach, E., Hurel, A., Issehut, B., Jean, F., Jorge, V., Jouineau, A., Kappner, J. P., Karkkainen, K., Kesalahti, R., Knutzen, F., Kujala, S. T., Kumpula, T. A., Labriola, M., Lalanne, C., Lambertz, J., Lascoux, M., Lejeune, V., Le-Provost, G., Levillain, J., Liesebach, M., Lopez-Quiroga, D., Meier, B., Malliarou, E., Marchon, J., Mariotte, N., Mas, A., Matesanz, S., Meischner, H., Michotey, C., Milesi, P., Morganti, S., Nievergelt, D., Notivol, E., Ostreng, G., Pakull, B., Perry, A., Piotti, A., Plomion, C., Poinot, N., Pringarbe, M., Puzos, L., Pyhajarvi, T., Raffin, A., Ramirez-Valiente, J. A., Rellstab, C., Remi, D., Richter, S., Robledo-Arnuncio, J. J., San Segundo, S., Savolainen, O., Schueler, S., Schneck, V., Scotti, I., Semerikov, V., Slamova, L., Sonstebo, J. H., Spanu, I., Thevenet, J., Tollefsrud, M. M., Turion, N., Vendramin, G. G., Villar, M., von Arx, G., Westin, J., Fady, B., Myking, T., Valladares, F., Aravanopoulos, F. A. & Cavers, S. (2021). The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species. Gigascience, 10.
Nieves-Orduña, H. E., Müller, M., Krutovsky, K. V. & Gailing, O. (2021). Geographic patterns of genetic variation among cacao (Theobroma cacao L.) populations based on chloroplast markers. Diversity, 13, 249.
Martinez-Sancho, E., Rellstab, C., Guillaume, F., Bigler, C., Fonti, P., Wohlgemuth, T. & Vitasse, Y. (2021). Post-glacial re-colonization and natural selection have shaped growth responses of silver fir across Europe. Science of the Total Environment, 779.
Major, E. I., Höhn, M., Avanzi, C., Fady, B., Heer, K., Opgenoorth, L., Piotti, A., Popescu, F., Postolache, D., Vendramin, G. G. & Csilléry, K. (2021). Fine‐scale spatial genetic structure across the species range reflects recent colonization of high elevation habitats in silver fir ( Abies alba Mill.). Molecular Ecology, 30, 5247-5265.
Dauphin, B., Rellstab, C., Schmid, M., Zoller, S., Karger, D. N., Brodbeck, S., Guillaume, F. & Gugerli, F. (2021). Genomic vulnerability to rapid climate warming in a tree species with a long generation time. Global Change Biology, 27, 1181-1195.
Dasgupta, M. G., Parveen, A. B. M., Shanmugavel, S., Dharanishanthi, V., Muthupandi, M., Kumar, N., Chauhan, S. S., Kalaivanan, J., Mohan, H. & Krutovsky, K. V. (2021). Targeted re-sequencing and genome-wide association analysis for wood property traits in breeding population of Eucalyptus tereticornis × E. grandis. Genomics, 113, 4276-4292.
Cuervo-Alarcon, L., Arend, M., Müller, M., Sperisen, C., Finkeldey, R. & Krutovsky, K. V. (2021). A candidate gene association analysis identifies SNPs potentially involved in drought tolerance in European beech (Fagus sylvatica L.). Scientific Report, 11, 1-15.
Benavides, R., Carvalho, B., Bastias, C. C., Lopez-Quiroga, D., Mas, A., Cavers, S., Gray, A., Albet, A., Alia, R., Ambrosio, O., Aravanopoulos, F., Aunon, F., Avanzi, C., Avramidou, E. V., Bagnoli, F., Ballesteros, E., Barbas, E., Bastien, C., Bernier, F., Bignalet, H., Bouic, D., Brunetto, W., Buchovska, J., Cabanillas-Saldana, A. M., Cheval, N., Climent, J. M., Correard, M., Cremer, E., Danusevicius, D., Dauphin, B., Del Cano, F., Denou, J. L., Dokhelar, B., Dourthe, R., Farsakoglou, A. M., Fera, A., Fonti, P., Ganopoulos, I., del Barrio, J. M. G., Gilg, O., Gonzalez-Martinez, S. C., Graf, R., Grivet, D., Gugerli, F., Hartleitner, C., Heer, K., Hollenbach, E., Hurel, A., Issehuth, B., Jean, F., Jorge, V., Jouineau, A., Kappner, J. P., Karkkainen, K., Kesalahti, R., Knutzen, F., Kujala, S. T., Kumpula, T., Labriola, M., Lalanne, C., Lambertz, J., Lascoux, M., Le Provost, G., Liesebach, M., Malliarou, E., Marchon, J., Mariotte, N., Martinez-Sancho, E., Matesanz, S., Meischner, H., Michotey, C., Milesi, P., Morganti, S., Myking, T., Nilsen, A. E., Notivol, E., Opgenoorth, L., Ostreng, G., Pakull, B., Piotti, A., Plomion, C., Poinot, N., Pringarbe, M., Puzos, L., Pyhajarvi, T., Raffin, A., Ramirez-Valiente, J. A., Rellstab, C., Richter, S., Robledo-Arnuncio, J. J., San Segundo, S., Savolainen, O., Schneck, V., Schueler, S., Scotti, I., Semerikov, V., Sonstebo, J. H., Spanu, I., Thevenet, J., Tollefsrud, M. M., Turion, N., Vendramin, G. G., Villar, M., Westin, J., Fady, B. & Valladares, F. (2021). The GenTree Leaf Collection: Inter- and intraspecific leaf variation in seven forest tree species in Europe. Global Ecology and Biogeography, 30, 590-597.
Belokopytova, L. V., Zhirnova, D. F., Meko, D. M., Babushkina, E. A., Vaganov, E. A. & Krutovsky, K. V. (2021). Tree rings reveal the impact of soil temperature on larch growth in the forest-steppe of Siberia. Forests, 12, 1765.
Waldvogel, A. M., Feldmeyer, B., Rolshausen, G., Exposito-Alonso, M., Rellstab, C., Kofler, R., Mock, T., Schmid, K., Schmitt, I., Bataillon, T., Savolainen, O., Bergland, A., Flatt, T., Guillaume, F. & Pfenninger, M. (2020). Evolutionary genomics can improve prediction of species' responses to climate change. Evolution Letters, 4, 4-18.
Vidyagina, E. O., Subbotina, N. M., Belyi, V. A., Lebedev, V. G., Krutovsky, K. V. & Shestibratov, K. A. (2020). Various effects of the expression of the xyloglucanase gene from Penicillium canescens in transgenic aspen under semi-natural conditions. BMC Plant Biology, 20, 1-14.
Reutimann, O., Gugerli, F. & Rellstab, C. (2020). A species-discriminatory single-nucleotide polymorphism set reveals maintenance of species integrity in hybridizing European white oaks (Quercus spp.) despite high levels of admixture. Ann Bot, 125, 663-676.
Putintseva, Y. A., Bondar, E.I., Simonov, E. P., Sharov, V. V., Oreshkova, N. V., Kuzmin, D. A., Konstantinov, Y. M., Shmakov, V. N., Belkov, V. I. & Sadovsky, M. S. (2020). Siberian larch (Larix sibirica Ledeb.) mitochondrial genome assembled using both short and long nucleotide sequence reads is currently the largest known mitogenome. BMC Genomics, 21.
Pettenkofer, T. A., Finkeldey, R., Müller, M., Krutovsky, K. V., Vornam, B., Leinemann, L. & Gailing, O. (2020). Development of novel Quercus rubra chloroplast genome CAPS markers for haplotype identification. Silvae Genetica, 69, 78-85.
Pettenkofer, T., Finkeldey, R., Müller, M., Krutovsky, K. V., Vornam, B., Leinemann, L. & Gailing, O. (2020). Genetic variation of introduced red oak (Quercus rubra) stands in Germany compared to North American populations. European Journal of Forest Research, 139, 321-331.
Olsson, S., Grivet, D., Cattonaro, F., Vendramin, V., Giovannelli, G., Scotti-Saintagne, C., Vendramin, G. G. & Fady, B. (2020). Evolutionary relevance of lineages in the European black pine (Pinus nigra) in the transcriptomic era. Tree Genetics & Genomes, 16.
Oliver, C., Oliver, G., Müller, M., Krutovsky, K. V. & Ludger, L. (2020). Crown morphology in Norway spruce (Picea abies [Karst.] L.) as adaptation to mountainous environments is associated with single nucleotide polymorphisms (SNPs) in genes regulating seasonal growth rhythm. Tree Genetics & Genomes, 16.
Mayol, M., Riba, M., Cavers, S., Grivet, D., Vincenot, L., Cattonaro, F., Vendramin, G. G. & Gonzalez-Martinez, S. C. (2020). A multiscale approach to detect selection in nonmodel tree species: Widespread adaptation despite population decline in Taxus baccata L. Evolutionary Applications, 13, 143-160.
Mataruga, M., Piotti, A., Danicic, V., Cvjetkovic, B., Fussi, B., Konnert, M., Vendramin, G. G. & Aleksic, J. M. (2020). Towards the dynamic conservation of Serbian spruce (Picea omorika) western populations. Annals of Forest Science, 77.
Martinez-Sancho, E., Slamova, L., Morganti, S., Grefen, C., Carvalho, B., Dauphin, B., Rellstab, C., Gugerli, F., Opgenoorth, L., Heer, K., Knutzen, F., von Arx, G., Valladares, F., Cavers, S., Fady, B., Alia, R., Aravanopoulos, F., Avanzi, C., Bagnoli, F., Barbas, E., Bastien, C., Benavides, R., Bernier, F., Bodineau, G., Bastias, C. C., Charpentier, J. P., Climent, J. M., Correard, M., Courdier, F., Danusevicius, D., Farsakoglou, A. M., del Barrio, J. M. G., Gilg, O., Gonzalez-Martinez, S. C., Gray, A., Hartleitner, C., Hurel, A., Jouineau, A., Karkkainen, K., Kujala, S. T., Labriola, M., Lascoux, M., Lefebvre, M., Lejeune, V., Le-Provost, G., Liesebach, M., Malliarou, E., Mariotte, N., Matesanz, S., Michotey, C., Milesi, P., Myking, T., Notivol, E., Pakull, B., Piotti, A., Plomion, C., Pringarbe, M., Pyhajarvi, T., Raffin, A., Ramirez-Valiente, J. A., Ramskogler, K., Robledo-Arnuncio, J. J., Savolainen, O., Schueler, S., Semerikov, V., Spanu, I., Thevenet, J., Tollefsrud, M. M., Turion, N., Veisse, D., Vendramin, G. G., Villar, M., Westin, J. & Fonti, P. (2020). The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe (vol 7, 1, 2020). Scientific Data, 7.
Lebedev, V. G., Subbotina, N. M., Maluchenko, O. P., Lebedeva, T. N., Krutovsky, K. V. & Shestibratov, K. A. (2020). Transferability and polymorphism of SSR markers located in flavonoid pathway genes in Fragaria and Rubus species. Genes, 11, 11.
Kuchma, O., Janz, D., Leinemann, L., Polle, A., Krutovsky, K. V. & Gailing, O. (2020). Hybrid and environmental effects on gene expression in poplar clones in pure and mixed with black locust stands. Forests, 11, 1075.
Kobolkuti, Z. A., Toth, E. G., Jahn, D., Heinze, B. & Hohn, M. (2020). SNP marker development in Pinus sylvestris L. in stress-responsive genes characterized from Pinus cembra L. transcriptomes. Molecular Biology Reports, 47, 4841-4847.
Habib, N. A., Müller, M., Gailing, O., Patzelt, A., Al Issai, G., Krutovsky, K. V. & Wiehle, M. (2020). Genetic diversity and differentiation of Olea europaea subsp. cuspidata in the Hajar Mountains of Oman. Genetic Resources and Crop Evolution, 68, 865-883.
Götz, J., Krutovsky, K. V., Leinemann, L., Müller, M., Rajora, O. P. & O., G. (2020). Chloroplast haplotypes of northern red oak (Quercus rubra L.) stands in Germany suggest their origin from northeastern Canada. Forests, 11, 1025.
Fady, B., Aravanopoulos, F., Benavides, R., Gonzalez-Martinez, S., Grivet, D., Lascoux, M., Lindner, M., Rellstab, C., Valladares, F. & Vinceti, B. (2020). Genetics to the rescue: managing forests sustainably in a changing world. Tree Genetics & Genomes, 16, 80.
Estravis-Barcala, M., Mattera, M. G., Soliani, C., Bellora, N., Opgenoorth, L., Heer, K. & Arana, M. V. (2020). Molecular bases of responses to abiotic stress in trees. Journal of Experimental Botany, 71, 3765-3779.
Dauphin, B., Wuest, R. O., Brodbeck, S., Zoller, S., Fischer, M. C., Holderegger, R., Gugerli, F. & Rellstab, C. (2020). Disentangling the effects of geographic peripherality and habitat suitability on neutral and adaptive genetic variation in Swiss stone pine. Molecular Ecology, 29, 1972-1989.
Caré, O., Gailing, O., Müller, M., Krutovsky, K. V. & Leinemann, L. (2020). Crown morphology in Norway spruce (Picea abies [Karst.] L.) as adaptation to mountainous environments is associated with single nucleotide polymorphisms (SNPs) in genes regulating seasonal growth rhythm. Tree Genetics & Genomes, 16, 4.
Caré, O., Gailing, O., Müller, M., Krutovsky, K. V. & Leinemann, L. (2020). Mating system in a native Norway spruce (Picea abies [L.] Karst.) stand - Relatedness and effective pollen population size show an association with the germination percentage of single tree progenies. Diversity, 12, 266.
Breidenbach, N., Sharov, V. V., Gailing, O. & Krutovsky, K. V. (2020). De novo transcriptome assembly of cold stressed clones of the hexaploid Sequoia sempervirens (D. Don) Endl. Scientific Data, 7.
Breidenbach, N., Gailing, O. & Krutovsky, K. V. (2020). Genetic structure of coast redwood (Sequoia sempervirens [D. Don] Endl.) populations in and outside of the natural distribution range based on nuclear and chloroplast microsatellite markers. PLoS One, 15, e0243556.
Bose, A. K., Moser, B., Rigling, A., Lehmann, M. M., Milcu, A., Peter, M., Rellstab, C., Wohlgemuth, T. & Gessler, A. (2020). Memory of environmental conditions across generations affects the acclimation potential of scots pine. Plant Cell and Environment, 43, 1288-1299.
Avanzi, C., Heer, K., Buntgen, U., Labriola, M., Leonardi, S., Opgenoorth, L., Piermattei, A., Urbinati, C., Vendramin, G. G. & Piotti, A. (2020). Individual reproductive success in Norway spruce natural populations depends on growth rate, age and sensitivity to temperature. Heredity, 124, 685-698.
Akulova, V. S., Sharov, V. V., Aksyonova, A. I., Putintseva, Y. A., Oreshkova, N. V., Feranchuk, S. I., Kuzmin, D. A., Pavlov, I. N., Litovka, Y. A. & Krutovsky, K. V. (2020). De novo sequencing, assembly and functional annotation of Armillaria borealis genome. BMC Genomics, 21, 534.
Yakovlev, I. A., Gackowski, D., Abakir, A., Viejo, M., Ruzov, A., Oliński, R., Fossdal, C. G. & Krutovsky, K. V. (2019). Mass spectrometry reveals the presence of specific set of epigenetic DNA modifications in the Norway spruce genome. Scientific Report, 9.
Wu, D., Koch, J., Coggeshall, M. & Carlson, J. (2019). The first genetic linkage map for Fraxinus pennsylvanica and syntenic relationships with four related species. Plant Molecular Biology, 99, 251-264.
Tarieiev, A., Olshanskyi, I., Gailing, O. & Krutovsky, K. V. (2019). Taxonomy of dark- and white-barked birches related to Betula pendula and B. pubescens (Betulaceae) in Ukraine based on both morphological traits and DNA markers. Botanical Journal of the Linnean Society, 191, 142–154.
Semizer-Cuming, D., Krutovsky, K. V., Baranchikov, Y. N., Kjӕr, E. D. & Williams, C. G. (2019). Saving the world’s ash forests calls for international cooperation now. Nature Ecology and Evolution, 3, 141–144.
Semerikov, V. L., Semerikova, S. A., Putintseva, Y. A., Oreshkova, N. V. & Krutovsky, K. V. (2019). Mitochondrial DNA in Siberian conifers indicates multiple postglacial colonization centers. Canadian Journal of Forest Research, 49, 875-883.
Scotti-Saintagne, C., Giovannelli, G., Scotti, I., Roig, A., Spanu, I., Vendramin, G. G., Guibal, F. & Fady, B. (2019). Recent, Late Pleistocene fragmentation shaped the phylogeographic structure of the European black pine (Pinus nigra Arnold). Tree Genetics & Genomes, 15.
Rellstab, C., Dauphin, B., Zoller, S., Brodbeck, S. & Gugerli, F. (2019). Using transcriptome sequencing and pooled exome capture to study local adaptation in the giga-genome of Pinus cembra. Molecular Ecology Resources, 19, 536-551.
Putintseva, Y., Bondar, E., Sharov, V., Simonov, E., Oreshkova, N., Kuzmin, D., Sadovsky, M. & Krutovsky, K. (2019). Assembling of the Siberian larch mitochondrial genome using long nucleotide sequence reads, the largest currently known mitogenome. Plant genetics, genomics, bioinformatics, and biotechnology (Plantgen 2019), 2019, 163.
Popescu, F., Postolache, D. & Curtu, A. L. (2019). The Current State of Forest Genetic Resources in Romania. In: M. Šijačić-Nikolić, J. Milovanović & M. Nonić (Eds.), Forests of Southeast Europe Under a Changing Climate: Conservation of Genetic Resources, pp. 61-72, Cham. Springer International Publishing.
Pettenkofer, T. A., Burkardt, K., Ammer, C., Vor, T., Finkeldey, R., Müller, M., Krutovsky, K. V., Vornam, B., Leinemann, L. & Gailing, O. (2019). Genetic diversity and diferentiation of introduced red oak (Quercus rubra) in Germany in comparison with reference native North American populations. European Journal of Forest Research, 138, 275–285.
Oreshkova, N. V., Bondar, E. I., Putintseva, Y. A., Sharov, V. V., Kuzmin, D. A. & Krutovsky, K. V. (2019). Development of nuclear microsatellite markers with long (tri-, tetra-, penta-and hexanucleotide) motifs for three larch species based on the de novo whole genome sequencing of Siberian larch (Larix sibirica Ledeb.). Russian Journal of Genetics, 55, 444-450.
Mosca, E., Cruz, F., Gómez-Garrido, J., Bianco, L., Rellstab, C., Brodbeck, S., Csilléry, K., Fady, B., Fladung, M. & Fussi, B. (2019). A reference genome sequence for the European silver fir (Abies alba Mill.): a community-generated genomic resource. G3: Genes, Genomes, Genetics, 9, 2039-2049.
Moler, E. R., Abakir, A., Eleftheriou, M., Johnson, J. S., Krutovsky, K. V., Lewis, L. C., Ruzov, A., Whipple, A. V. & Rajora, O. P. (2019). Population Epigenomics: Advancing Understanding of Phenotypic Plasticity, Acclimation, Adaptation and Diseases. In: Population Genomics: Concepts, Approaches and Applications, pp. 179-260 Springer, Cham.
Meger, J., Ulaszewski, B., Vendramin, G. G. & Burczyk, J. (2019). Using reduced representation libraries sequencing methods to identify cpDNA polymorphisms in European beech (Fagus sylvatica L). Tree Genetics & Genomes, 15.
Lu, M., Loopstra, C. A. & Krutovsky, K. V. (2019). Detecting the genetic basis of local adaptation in loblolly pine (Pinus taeda L.) using whole exome-wide genotyping and an integrative landscape genomics analysis approach. Ecology and Evolution, 9, 6798-6809.
Lu, M., Krutovsky, K. V. & Loopstra, C. A. (2019). Predicting adaptive genetic variation of loblolly pine (Pinus taeda L.) populations under projected future climates based on multivariate models. Journal of Heredity, 110, 857–865.
Lebedev, V. G., Subbotina, N. M., Maluchenko, O. P., Krutovsky, K. V. & Shestibratov, K. A. (2019). Assessment of genetic diversity in differently colored raspberry cultivars using SSR markers located in flavonoid biosynthesis genes. Agronomy, 9, 518.
Lebedev, V. G., Krutovsky, K. V. & Shestibratov, K. A. (2019). … Fell Upas Sits, the Hydra-Tree of Death, or the Phytotoxicity of Trees. Molecules, 24, 1636.
Lebedev, V. G., Krutovsky, K. V. & Shestibratov, K. A. (2019). Effect of Phosphinothricin on Transgenic Downy Birch (Betula pubescens Ehrh.) Containing bar or GS1 Genes. Forests, 10, 1067.
Kuzmin, D. A., Feranchuk, S. I., Sharov, V. V., Cybin, A. N., Makolov, S. V., Putintseva, Y. A., Oreshkova, N. V. & Krutovsky, K. V. (2019). Stepwise large genome assembly approach: a case of Siberian larch (Larix sibirica Ledeb.). BMC Bioinformatics, 20, 37.
Kryvokhyzha, M. V., Krutovsky, K. V. & Rashydov, N. M. (2019). Differential expression of flowering genes in Arabidopsis thaliana under chronic and acute ionizing radiation. International Journal of Radiation Biology, 95, 626–634.
Krutovsky, K. V., Putintseva, Y. A., Oreshkova, N. V., Bondar, E. I., Sharov, V. V. & Kuzmin, D. A. (2019). Postgenomic technologies in practical forestry: development of genome-wide markers for timber origin identification and other applications. Forest Engineering Journal, 9, 9-16.
Kornienko, I. V., Faleeva, T. G., Oreshkova, N. V., Grigoriev, S. E., Grigoreva, L. V., Putintseva, Y. A. & Krutovsky, K. V. (2019). Structural and Functional Organization of the Mitochondrial DNA Control Region in the Woolly Mammoth (Mammuthus primigenius). Molecular Biology, 53, 560–570.
Konopkova, A., Krajmerova, D., Kurjak, D., Kmet, J., Psidova, E., Kucerova, J., Hrivnak, M., Longauer, R., Ditmarova, L. & Gomory, D. (2019). Nucleotide polymorphisms associated with climate and physiological traits in silver fir (Abies alba Mill.) provenances. Flora, 250, 37-43 %38 Jan %! Nucleotide polymorphisms associated with climate and physiological traits in silver fir (Abies alba Mill.) provenances %@ 0367-2530.
Kolesnikova, A. I., Putintseva, Y. A., Simonov, E. P., Biriukov, V. V., Oreshkova, N. V., Pavlov, I. N., Sharov, V. V., Kuzmin, D. A., Anderson, J. & Krutovsky, K. V. (2019). Mobile genetic elements explain size variation in the mitochondrial genomes of four closely-related Armillaria species. BMC Genomics, 20, 1-14.
Johnson, J. S., Krutovsky, K. V., Rajora, O. P., Gaddis, K. D. & Cairns, D. M. (2019). Advancing Biogeography Through Population Genomics. In: Population Genomics: Concepts, Approaches and Applications, pp. 539-585 Springer International Publishing AG, part of Springer Nature.
de Melo Moura, C. C., Brambach, F., Bado, K. J. H., Krutovsky, K. V., Kreft, H., Tjitrosoedirdjo, S. S., Siregar, I. Z. & O., G. (2019). Integrating DNA barcoding and traditional taxonomy for the identification of dipterocarps in remnant lowland forests of Sumatra. Plants, 8, 461.
Chiveu, J. C., Mueller, M., Krutovsky, K. V., Kehlenbeck, K., Pawelzik, E. & Naumann, M. (2019). Genetic diversity of common guava in Kenya: an underutilized naturalized fruit species. Fruits, 74, 236–248.
Chen, J., Li, L. L., Milesi, P., Jansson, G., Berlin, M., Karlsson, B., Aleksic, J., Vendramin, G. G. & Lascoux, M. (2019). Genomic data provide new insights on the demographic history and the extent of recent material transfers in Norway spruce. Evolutionary Applications, 12, 1539-1551.
Carbognani, M., Piotti, A., Leonardi, S., Pasini, L., Spanu, I., Vendramin, G. G., Tomaselli, M. & Petraglia, A. (2019). Reproductive and genetic consequences of extreme isolation in Salix herbacea L. at the rear edge of its distribution. Annals of Botany, 124, 849-860.
Brenner, W. G., Mader, M., Muller, N. A., Hoenicka, H., Schroeder, H., Zorn, I., Fladung, M. & Kersten, B. (2019). High Level of Conservation of Mitochondrial RNA Editing Sites Among Four Populus Species. G3: Genes, Genomes, Genetics, 9, 709-717.
Breidenbach, N., Gailing, O. & Krutovsky, K. V. (2019). Development of novel polymorphic nuclear and chloroplast microsatellite markers in coast redwood (Sequoia sempervirens). Plant Genetic Resources, 17, 293–297.
Breidenbach, N., Gailing, O. & Krutovsky, K. V. (2019). Assignment of frost tolerant coast redwood trees of unknown origin to populations within their natural range using nuclear and chloroplast microsatellite genetic markers. bioRxiv, 732834.
Bondar, E. I., Putintseva, Y. A., Oreshkova, N. V. & Krutovsky, K. V. (2019). Siberian larch (Larix sibirica Ledeb.) chloroplast genome and development of polymorphic chloroplast markers. BMC Bioinformatics, 20, 38.
Balkenhol, N., Dudaniec, R. Y., Krutovsky, K. V., Johnson, J. S., Cairns, D. M., Segelbacher, G., Selkoe, K. A., von der Heyden, S., Wang, I. J. & Selmoni, O. (2019). Landscape genomics: Understanding relationships between environmental heterogeneity and genomic characteristics of populations. In: Population Genomics: Concepts, Approaches and Applications, pp. 261-322 Springer, Cham.
Babushkina, E. A., Zhirnova, D. F., Belokopytova, L. V., Tychkov, I. I., Vaganov, E. A. & K. V., K. (2019). Response of four tree species to changing climate in a moisture-limited area of South Siberia. Forests, 10, 999.
Avanzi, C., Piermattei, A., Piotti, A., Büntgen, U., Heer, K., Opgenoorth, L., Spanu, I., Urbinati, C., Vendramin, G. G. & Leonardi, S. (2019). Disentangling the effects of spatial proximity and genetic similarity on individual growth performances in Norway spruce natural populations. Science of The Total Environment, 650, 493-504.
Aravanopoulos, F. A., Alizoti, P. G., Tourvas, N., Malliarou, E., Avramidou, E. V., Korompoki, I.-V., Kotina, V.-M., Barbas, E. & Farsakoglou, A.-M. (2019). Overview on Forest Genetic Monitoring (FGM) Including Case Studies on FGM for Two Species from Greece. In: M. Šijačić-Nikolić, J. Milovanović & M. Nonić (Eds.), Forests of Southeast Europe Under a Changing Climate: Conservation of Genetic Resources, pp. 401-407, Cham. Springer International Publishing.
Wohlmuth, A., Essl, F. & Heinze, B. (2018). Genetic analysis of inherited reduced susceptibility of Fraxinus excelsior L. seedlings in Austria to ash dieback. Forestry, 91, 514-525.
Wachowiak, W., Zaborowska, J., Labiszak, B., Perry, A., Zucca, G. M., Gonzalez-Martinez, S. C. & Cavers, S. (2018). Molecular signatures of divergence and selection in closely related pine taxa. Tree Genetics & Genomes, 14.
Trujillo-Moya, C., George, J. P., Fluch, S., Geburek, T., Grabner, M., Karanitsch-Ackerl, S., Konrad, H., Mayer, K., Sehr, E. M., Wischnitzki, E. & Schueler, S. (2018). Drought Sensitivity of Norway Spruce at the Species' Warmest Fringe: Quantitative and Molecular Analysis Reveals High Genetic Variation Among and Within Provenances. G3-Genes Genomes Genetics, 8, 1225-1245.
Simonov, E., Lisachov, A., Oreshkova, N. & Krutovsky, K. V. (2018). The mitogenome of Elaphe bimaculata (Reptilia: Colubridae) has never been published: a case with the complete mitochondrial genome of E. dione. Acta Herpetologica, 13, 185-189.
Shestibratov, K. A., Baranov, O. Y., Subbotina, N. M., Lebedev, V. G., Panteleev, S. V., Krutovsky, K. V. & Padutov, V. E. (2018). Early Detection and Identification of the Main Fungal Pathogens for Resistance Evaluation of New Genotypes of Forest Trees. Forests, 9, 732.
Semerikov, V. L., Semerikova, S. A., Putintseva, Y. A., Tarakanov, V. V., Tikhonova, I. V., Vidyakin, A. I., Oreshkova, N. V. & Krutovsky, K. V. (2018). Colonization history of Scots pine in Eastern Europe and North Asia based on mitochondrial DNA variation. Tree Genetics & Genomes, 14, 8.
Santini, F., Andrisano, T., Leonardi, S., Ciaschetti, G., Labriola, M., Vendramin, G. G. & Piotti, A. (2018). Tracking the origin of silver fir plantations along the boundary between different genetic clusters in central Apennines: Implications for their management. Forest Ecology and Management, 408, 220-227.
Raffl, H., Konrad, H., Curtu, A. L. & Geburek, T. (2018). Genetic evidence of human mediated, historical seed transfer from the Tyrolean Alps to the Romanian Carpathians in Larix decidua (Mill.) forests. Annals of Forest Science, 75.
Piotti, A., Garbarino, M., Avanzi, C., Berretti, R., Motta, R., Piovani, P. & Leonardi, S. (2018). Influence of Spatiotemporal Dynamics on the Fine-Scale Spatial Genetic Structure of Differently Managed Picea abies Stands. Forests, 9.
Pavlov, I. N., Litovka, Y. A., Ryazanova, T. V., Chuprova, N. A., Litvinova, E. A., Putintseva, Y. A., Kües, U. & Krutovsky, K. V. (2018). Phylogenetic Relationships, Pathogenic Traits, and Wood-Destroying Properties of Porodaedalea niemelaei M. Fischer Isolated in the Northern Forest Limit of Larix gmelinii Open Woodlands in the Permafrost Area. Journal of Siberian Federal University. Biology, 11, 30-48.
Paule, J., Paule, L. & Gomory, D. (2018). Small genome size variation across the range of European beech (Fagus sylvatica). Plant Systematics and Evolution, 304, 577-582 %578 Apr %! Small genome size variation across the range of European beech (Fagus sylvatica) %@ 0378-2697.
Novikova, S. V., Sadovsky, M. G., Putintseva, Y. A., Oreshkova, N. V. & Krutovsky, K. V. (2018) Symmetry in a Four-Cluster Triangle Structure of the Siberian Stone Pine (Pinus sibirica Du Tour) Transcriptome 2, 55.
Neuschulz, E. L., Merges, D., Bollmann, K., Gugerli, F. & Böhning-Gaese, K. (2018). Biotic interactions and seed deposition rather than abiotic factors determine recruitment at elevational range limits of an alpine tree. Journal of Ecology, 106, 948-959.
Nawaz, M. A., Krutovsky, K. V., Mueller, M., Gailing, O., Khan, A. A., Buerkert, A. & Wiehle, M. (2018). Morphological and Genetic Diversity of Sea Buckthorn (Hippophae rhamnoides L.) in the Karakoram Mountains of Northern Pakistan. Diversity, 10, 76.
Müller, M., Cuervo-Alarcon, L., Gailing, O., K.C., R., Chhetri, M. S., Seifert, S., Arend, M., Krutovsky, K. V. & Finkeldey, R. (2018). Genetic Variation of European Beech Populations and Their Progeny from Northeast Germany to Southwest Switzerland. Forests, 9, 469.
Mueller, M., Cuervo-Alarcon, L., Gailing, O., Rajendra, K. C., Chhetri, M. S., Seifert, S., Arend, M., Krutovsky, K. V. & Finkeldey, R. (2018). Genetic Variation of European Beech Populations and Their Progeny from Northeast Germany to Southwest Switzerland. Forests, 9, 469.
Mosca, E., Di Pierro, E. A., Budde, K. B., Neale, D. B. & Gonzalez-Martinez, S. C. (2018). Environmental effects on fine-scale spatial genetic structure in four Alpine keystone forest tree species. Molecular Ecology, 27, 647-658.
Markus, M., Laura, C.-A., Oliver, G., Rajendra, K., Meena, S. C., Sarah, S., Matthias, A., Krutovsky, K. V. & Reiner, F. (2018). Genetic Variation of European Beech Populations and Their Progeny from Northeast Germany to Southwest Switzerland.
Lu, M., Seeve, C. M., Loopstra, C. A. & Krutovsky, K. V. (2018). Exploring the genetic basis of gene transcript abundance and metabolite levels in loblolly pine (Pinus taeda L.) using association mapping and network construction. BMC Genetics, 19, 1-13.
Liu, C. L. C., Kuchma, O. & Krutovsky, K. V. (2018). Mixed-species versus monocultures in plantation forestry: Development, benefits, ecosystem services and perspectives for the future. Global Ecology and Conservation, 15, 1-13.
Lendvay, B., Hartmann, M., Brodbeck, S., Nievergelt, D., Reinig, F., Zoller, S., Parducci, L., Gugerli, F., Büntgen, U. & Sperisen, C. (2018). Improved recovery of ancient DNA from subfossil wood – application to the world’s oldest Late Glacial pine forest. New Phytologist, 217, 1737–1748.
Kornienko, I. V., Faleeva, T. G., Oreshkova, N. V., Grigoriev, S. E., Grigoreva, L. V., Simonov, E. P., Kolesnikova, A. I., Putintseva, Y. A. & Krutovsky, K. V. (2018). Complete mitochondrial genome of a woolly mammoth (Mammuthus primigenius) from Maly Lyakhovsky Island (New Siberian Islands, Russia) and its phylogenetic assessment. Mitochondrial DNA Part B, 3, 596-598.
Konopkova, A., Kurjak, D., Kmet, J., Klumpp, R., Longauer, R., Ditmarova, L. & Gomory, D. (2018). Differences in photochemistry and response to heat stress between silver fir (Abies alba Mill.) provenances. Trees-Structure and Function, 32, 73-86 %78 Feb %! Differences in photochemistry and response to heat stress between silver fir (Abies alba Mill.) provenances %@ 0931-1890.
Kobolkuti, Z. A. & Hohn, M. (2018). Habitat type differentation in peripheral Pinus sylvestris populations based on seed traits and germination data. Studia botanica hungarica, 49, 97-119.
Johnson, J. S., Krutovsky, K. V., Rajora, O. P., Gaddis, K. D. & Cairns, D. M. (2018). Advancing Biogeography Through Population Genomics. In: O. P. Rajora (Ed. Population Genomics: Concepts, Approaches and Applications, pp. 1-47 Springer International Publishing AG.
Heer, K., Ullrich, K. K., Hiss, M., Liepelt, S., Brüning, R. S., Zhou, J., Opgenoorth, L. & Rensing, S. A. (2018). Detection of somatic epigenetic variation in Norway spruce via targeted bisulfite sequencing. Ecology and Evolution, 8, 9672-9682.
Heer, K., Behringer, D., Piermattei, A., Bässler, C., Brandl, R., Fady, B., Jehl, H., Liepelt, S., Lorch, S., Piotti, A., Vendramin, G. g., Weller, M., Ziegenhagen, B., Büntgen, U. & Opgenoorth, L. (2018). Linking dendroecology and association genetics in natural populations: Stress responses archived in tree rings associate with SNP genotypes in silver fir (Abies alba Mill.). Molecular Ecology, 27, 1428-1438.
Gomory, D., Paule, L. & Macejovsky, V. (2018). Phylogeny of beech in western Eurasia as inferred by approximate Bayesian computation. Acta Societatis Botanicorum Poloniae, 87.
Cuervo-Alarcon, L., Arend, M., Müller, M., Sperisen, C., Finkeldey, R. & Krutovsky, K. V. (2018). Genetic variation and signatures of natural selection in populations of European beech (Fagus sylvatica L.) along precipitation gradients. Tree Genetics & Genomes, 14.
Csillery, K., Rodriguez-Verdugo, A., Rellstab, C. & Guillaume, F. (2018). Detecting the genomic signal of polygenic adaptation and the role of epistasis in evolution. Molecular Ecology, 27, 606-612.
Caré, O., Müller, M., Vornam, B., Höltken, A. M., Kahlert, K., Krutovsky, K. V., Gailing, O. & Leinemann, L. (2018). Hight morphological differentiation in crown architecture is weakly reflected in the population genetic structure of German Norway spruce stands. Forests, 9, 752.
Bruegmann, T., Wetzel, H., Hettrich, K., Smeds, A., Willfor, S., Kersten, B. & Fladung, M. (2018). Knockdown of PCBER1, a gene of neolignan biosynthesis, resulted in increased poplar growth. Planta.
Breidenbach, N., Gailing, O. & Krutovsky, K. V. (2018). Development of novel polymorphic nuclear and chloroplast microsatellite markers in coast redwood (Sequoia sempervirens). Plant Genetic Resources: Characterization and Utilization.
Blanc-Jolivet, C., Yanbaev, Y., Kersten, B. & Degen, B. (2018). A set of SNP markers for timber tracking of Larix spp. in Europe and Russia. Forestry, 91, 614-628.
Biriukov, V. V., Sadovsky, M. G., Putintseva, Y. A., Oreshkova, N. V. & Krutovsky, K. V. (2018) Symmetry in the Transcriptome and Genome Sequences of Siberian Larch (Larix sibirica Ledeb.) 2, 57.
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Ali, H., Abubakari, A., Wiehle, M. & Krutovsky, K. (2018). Gene-specific sex-linked genetic markers in date palm (Phoenix dactylifera L.). Genetic Resources and Crop Evolution, 65, 1-10.
Uhrinova, V., Zozomova-Lihova, J., Bernatova, D., Paule, J., Paule, L. & Gomory, D. (2017). Origin and genetic differentiation of pink- flowered Sorbus hybrids in the Western Carpathians. Annals of Botany, 120, 271-284.
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Toth, E. G., Vendramin, G. G., Bagnoli, F., Cseke, K. & Hohn, M. (2017). High genetic diversity and distinct origin of recently fragmented Scots pine (Pinus sylvestris L.) populations along the Carpathians and the Pannonian Basin. Tree Genetics & Genomes, 13.
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Piotti, A., Leonarduzzi, C., Postolache, D., Bagnoli, F., Spanu, I., Brousseau, L., Urbinati, C., Leonardi, S. & Vendramin, G. G. (2017). Unexpected scenarios from Mediterranean refugial areas: disentangling complex demographic dynamics along the Apennine distribution of silver fir. Journal of Biogeography, 44, 1547-1558.
Oreshkova, N. V., Putintseva, Y. A., Sharov, V. V., Kuzmin, D. A. & Krutovsky, K. V. (2017). Development of microsatellite genetic markers in Siberian larch (Larix sibirica Ledeb.) based on the de novo whole genome sequencing. Russian Journal of Genetics, 53, 1194-1199.
Mosner, E., Eimert, K., Hüwe, U., Ziegenhagen, B., Janßen, A. & Leyer, I. (2017). Revisiting the provenance delineation of a widespread shrub, Frangula alnus—the role of spatial, temporal and environmental patterns. Tree Genetics & Genomes, 13, 63.
Moskalev, A. А., Kudryavtseva, A. V., Graphodatsky, A. S., Beklemisheva, V. R., Serdyukova, N. A., Krutovsky, K. V., Sharov, V. V., Kulakovskiy, I. V., Lando, A. S. & Kasianov, A. S. (2017). De novo assembling and primary analysis of genome and transcriptome of gray whale Eschrichtius robustus. BMC Evolutionary Biology, 17, 256.
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Johnson, S. J., Chhetri, K. P., Krutovsky, V. K. & Cairns, M. D. (2017). Growth and Its Relationship to Individual Genetic Diversity of Mountain Hemlock (Tsuga mertensiana) at Alpine Treeline in Alaska: Combining Dendrochronology and Genomics. Forests, 8, 1-15.
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Johnson, J. S., Gaddis, K. D., Cairns, D. M., Konganti, K. & Krutovsky, K. V. (2017). Landscape genomic insights into the historic migration of mountain hemlock in response to Holocene climate change. American Journal of Botany, 104, 439-450.
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